Head of Core Facility
Csaba Bödör, PhD

Core Facility Address
Department of Pathology and Experimental Cancer Research
Üllői út 26.
1085 Budapest

Contact E-mail
to: Csaba Bödör, PhD
bodor.csaba1@semmelweis.hu

Number of staff
2

Quality Control
ISO 9001

What we offer

NanoString GeoMx® DSP experiment projects with the reagent kits available from the manufacturer.

  • NanoString GeoMx® DSP tissue slide preparation and region-of-interest selection for RNA targets
  • NanoString GeoMx® DSP tissue slide preparation and region-of-interest selection for protein targets
  • Readout with the NanoString nCounter system or next-generation sequencing (Illumina MiSeq or NextSeq2000)
  • Downstream data analysis using the on-board software of the GeoMx® DSP system
  • Remote Desktop approaches can be used to instrument the GeoMx platform in order to afford ROI selection and data analysis for external researchers.

Why work with us

  • Our spatial transcriptomics and proteomics core facility utilizing the Nanostring GeoMx® platform provides an end-to-end solution for spatially resolved analyses with downstream next-generation sequencing based readouts also available in our laboratory.

equipmentS

  • NanoString’s GeoMx Digital Spatial Profiler (DSP)
  • MiSeq next-generation sequencer (Illumina)
  • NextSeq2000 next-generation sequencer (Illumina)

 

 

References