{"id":10746,"date":"2025-01-06T15:23:46","date_gmt":"2025-01-06T14:23:46","guid":{"rendered":"https:\/\/semmelweis.hu\/bioinformatika\/?page_id=10746"},"modified":"2026-01-12T11:43:47","modified_gmt":"2026-01-12T10:43:47","slug":"2025-ben-megjelent-publikacioink","status":"publish","type":"page","link":"https:\/\/semmelweis.hu\/bioinformatika\/2025-ben-megjelent-publikacioink\/","title":{"rendered":"2025-ben megjelent publik\u00e1ci\u00f3ink"},"content":{"rendered":"

1. <\/span>Menyhart O, Kothalawala WJ, Gy\u0151rffy B<\/b><\/span>. A gene set enrichment analysis for cancer hallmarks. <\/span>J Pharm Anal<\/b><\/span>. 2025. m\u00e1jus;15(5):101065. <\/span><\/p>\n

2. Guedes J, Woldmar N, <\/span>Szasz AM<\/b><\/span>, Wieslander E, Paw\u0142owski K, Horvatovich P, \u00e9s mtsai. A perspective on integrating digital pathology, proteomics, clinical data and AI analytics in cancer research<\/span>. J Proteomics<\/b><\/span>. 2025. szeptember 15.;320:105493. <\/span><\/p>\n

3. Ungvari Z, Fekete M, <\/span>Fekete JT<\/b><\/span>, Grosso G, Ungvari A, <\/span>Gy\u0151rffy B.<\/b><\/span> Adherence to the Mediterranean diet and its protective effects against colorectal cancer: a meta-analysis of 26 studies with 2,217,404 participants. <\/span>GeroScience<\/b><\/span>. 2025. febru\u00e1r;47(1):1105\u201321. <\/span><\/p>\n

4. Caruso A, Accattatis FM, Giordano C, Gelsomino L<\/span>, Del Console P<\/b><\/span>, Fiorita MF, \u00e9s mtsai. Adipocyte\/Tumor cell crosstalk via IGF-1\/TXNIP axis promotes malignancy and endocrine resistance in breast cancer. <\/span>Cell Commun Signal<\/b><\/span> CCS. 2025. j\u00fanius 3.;23(1):262. <\/span><\/p>\n

5. Ungvari Z, Fekete M, Varga P, Lehoczki A, <\/span>Munk\u00e1csy G, Fekete JT,<\/b><\/span> \u00e9s mtsai. Association between red and processed meat consumption and colorectal cancer risk: a comprehensive meta-analysis of prospective studies. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius;47(3):5123\u201340. <\/span><\/p>\n

6. Sawada Y, Kikugawa T, Onishi T, Arai O, Iio H, Miura N, <\/span>Gyorffy B<\/b><\/span>. \u00e9s mtsai. CTHRC1 promotes bone metastasis in prostate cancer. <\/span>Int J Cancer<\/b><\/span>. 2025. j\u00fanius 21.; <\/span><\/p>\n

7. Ungvari Z, Fekete M, Buda A, Lehoczki A, <\/span>Fekete JT<\/b><\/span>, Varga P, \u00e9s mtsai. Depression increases cancer mortality by 23-83%: a meta-analysis of 65 studies across five major cancer types. <\/span>GeroScience.<\/b><\/span> 2025. m\u00e1jus 2.; <\/span><\/p>\n

8. Callari M, Dugo M, Barreca M, <\/span>Gy\u0151rffy B<\/b><\/span>, Galbardi B, Vigano L, \u00e9s mtsai. Determinants of response and molecular dynamics in HER2+ER+ breast cancers from the NA-PHER2 trial receiving HER2-targeted and endocrine therapies. <\/span>Nat Commun<\/b><\/span>. 2025. m\u00e1rcius 4.;16(1):2195. <\/span><\/p>\n

9. Nemeth Z, Eros K, <\/span>Munkacsy G<\/b><\/span>, Koller A. Differential Gene and Protein Expressions Responsible for Vasomotor Signaling Provide Mechanistic Bases for the Opposite Flow-Induced Responses of Pre- and Post-Circle of Willis Arteries. <\/span>Life Basel Switz<\/b><\/span>. 2025. m\u00e1jus 26.;15(6):856. <\/span><\/p>\n

10. Olah C, Mairinger F, Wessolly M, Joniau S, Spahn M, Kruithof-de Julio M, <\/span>Gyorffy B.<\/b><\/span> \u00e9s mtsai. Enhancing risk stratification models in localized prostate cancer by novel validated tissue biomarkers. <\/span>Prostate Cancer Prostatic Dis<\/b><\/span>. 2025. szeptember;28(3):773\u201381. <\/span><\/p>\n

11. <\/span>M\u00fcller D, Gy\u0151rffy B<\/b><\/span>. EpigenPlot: An interactive web platform for DNA methylation-based biomarker and drug target discovery in colorectal cancer. <\/span>Br J Pharmacol<\/b><\/span>. 2025. \u00e1prilis;182(7):1452\u201365. <\/span><\/p>\n

12. Ungvari Z, Fekete M, Varga P, <\/span>Munk\u00e1csy G, Fekete JT, <\/b><\/span>Lehoczki A, \u00e9s mtsai. Exercise and survival benefit in cancer patients: evidence from a comprehensive meta-analysis. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):5235\u201355. <\/span><\/p>\n

13. <\/span>Munk\u00e1csy G,<\/b><\/span> Santarpia L, <\/span>Gy\u0151rffy B.<\/b><\/span> Exploring immune activation patterns in HER2-low and HER2-ultralow breast cancer subtypes. <\/span>The Oncologist<\/b><\/span>. 2025. j\u00fanius 4.;30(6):oyaf081. <\/span><\/p>\n

14. Li X, Rossing M, Mois\u00e9s da Silva A, Bose M, Gudj\u00f3nsson T, Benada J, <\/span>Szallasi Z<\/b><\/span> \u00e9s mtsai. G6PC3 promotes genome maintenance and is a candidate mammary tumor suppressor. <\/span>JCI Insight<\/b><\/span>. 2025. j\u00fanius 9.;10(11):e186747. <\/span><\/p>\n

15. Kilim O, Olar A, Biricz A, Madaras L, Pollner P, <\/span>Sz\u00e1ll\u00e1si Z<\/b><\/span>, \u00e9s mtsai. Histopathology and proteomics are synergistic for High-Grade Serous Ovarian Cancer platinum response prediction. <\/span>MedRxiv Prepr Serv Health Sci.<\/b><\/span> 2024. j\u00fanius 3.;2024.06.01.24308293. <\/span><\/p>\n

16. Sanvicente A, Nieto-Jim\u00e9nez C, Morafraile EC, D\u00edaz-Tejeiro C, Barber\u00e1n VG, Segura PP, <\/span>Gyorffy B<\/b><\/span> \u00e9s mtsai. Identification of Deregulated Proteins in Mutated BRCA1\/2 Breast and Ovarian Cancers for Vectorized Biologics. <\/span>Cancers<\/b><\/span>. 2025. j\u00falius 1.;17(13):2208. <\/span><\/p>\n

17. Ungvari Z, Fekete M, Varga P, <\/span>Fekete JT,<\/b><\/span> Lehoczki A, Buda A, \u00e9s mtsai. Imbalanced sleep increases mortality risk by 14-34%: a meta-analysis. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius;47(3):4545\u201366. <\/span><\/p>\n

18. Ungvari Z, Fekete M, Varga P, <\/span>Fekete JT,<\/b><\/span> Buda A, Szappanos \u00c1, \u00e9s mtsai. Impact of adherence to the Mediterranean diet on stroke risk. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius;47(3):3565\u201381. <\/span><\/p>\n

19. P Shanmugam S, Zhou Y, Stelter I, Hanlon T, Bekele RT, Bellmunt J, <\/span>Szallasi Z<\/b><\/span>, \u00e9s mtsai. Impact of DNA repair deficiency on sensitivity to antibody-drug conjugate (ADC) payloads in bladder cancer. <\/span>Bladder Cancer Amst Neth.<\/b><\/span> 2025;11(1):23523735251317865. <\/span><\/p>\n

20. Nieto-Jim\u00e9nez C, Garcia-Lorenzo E, Diaz-Tejeiro C, Paniagua-Herranz L, Sanvicente A, Doger B, <\/span>Munkacsy Gy, Gyorffy B<\/b><\/span> \u00e9s mtsai. In silico evaluation of the immunogenic profile of lung cancers with SMARCA4 genetic alterations. <\/span>Sci Rep.<\/b><\/span> 2025. m\u00e1jus 22.;15(1):17832. <\/span><\/p>\n

21. Ungvari Z, Fekete M, Lehoczki A, <\/span>Munk\u00e1csy G<\/b><\/span>, <\/span>Fekete JT<\/b><\/span>, Z\u00e1b\u00f3 V, \u00e9s mtsai. Inadequate sleep increases stroke risk: evidence from a comprehensive meta-analysis of incidence and mortality. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius;47(3):4679\u201395. <\/span><\/p>\n

22. Ocana A, Pandiella A, Privat C, Bravo I, Luengo-Oroz M, Amir E, <\/span>Gyorffy B<\/b><\/span> \u00e9s mtsai. Integrating artificial intelligence in drug discovery and early drug development: a transformative approach. <\/span>Biomark Res.<\/b><\/span> 2025. m\u00e1rcius 14.;13(1):45. <\/span><\/p>\n

23. Major E, Lin KH, Lee SC, K\u00e1ldi K, <\/span>Gy\u0151rffy B,<\/b><\/span> Tigyi GJ, \u00e9s mtsai. LPA suppresses HLA-DR expression in human melanoma cells: a potential immune escape mechanism involving LPAR1 and DR6-mediated release of IL-10. <\/span>Acta Pharmacol Sin<\/b><\/span>. 2025;46(1):222\u201330. <\/span><\/p>\n

24.<\/span> Bartha \u00c1<\/b><\/span>, <\/span>Weltz B,<\/b><\/span> Betancourt LH, Gil J, Pinto de Almeida N, Bianchini G, \u00e9s mtsai. Melanoma Proteomics Unveiled: Harmonizing Diverse Data Sets for Biomarker Discovery and Clinical Insights via MEL-PLOT. <\/span>J Proteome Res<\/b><\/span>. 2025. j\u00fanius 6.;24(6):3117\u201328. <\/span><\/p>\n

25. <\/span>Fekete JT, Gy\u0151rffy B.<\/b><\/span> MetaAnalysisOnline.com: Web-Based Tool for the Rapid Meta-Analysis of Clinical and Epidemiological Studies. <\/span>J Med Internet Res<\/b><\/span>. 2025. m\u00e1rcius 6.;27:e64016. <\/span><\/p>\n

26. Fich\u00f3 E, Pancsa R, Magyar C, Kalman ZE, Sch\u00e1d \u00c9, N\u00e9meth BZ, <\/span>Dobson L, Tusnady G<\/b><\/span> \u00e9s mtsai. MFIB 2.0: a major update of the database of protein complexes formed by mutual folding of the constituting protein chains. <\/span>Nucleic Acids Res<\/b><\/span>. 2025;53(D1):D487\u201394. <\/span><\/p>\n

27. Kim Y, Doma V, \u00c7ak\u0131r U, Kuras M, Betancourt LH, Pla I, <\/span>Szasz AM<\/b><\/span> \u00e9s mtsai. Mitochondrial proteome landscape unveils key insights into melanoma severity and treatment strategies. <\/span>Cancer.<\/b><\/span> 2025. j\u00falius 1.;131(13):e35897. <\/span><\/p>\n

28. Ungvari Z, Fekete M, Buda A, Lehoczki A, <\/span>Fekete JT, Munk\u00e1csy G<\/b><\/span>, \u00e9s mtsai. No detectable impact of short-term treatment delays on lung cancer survival. <\/span>GeroScience<\/b><\/span>. 2025. m\u00e1jus 7.; <\/span><\/p>\n

29. T\u00f3th E, <\/span>Posta M,<\/b><\/span> Gy\u00f6rffy B,<\/b><\/span> Oravecz O, Farkas E, Balogh A, \u00e9s mtsai. Novel proteomics biomarkers of recurrent pregnancy loss reflect the dysregulation of immune interactions at the maternal-fetal interface. <\/span>Front Immunol.<\/b><\/span> 2025;16:1621168. <\/span><\/p>\n

30. Ungvari Z, <\/span>Menyhart O, <\/b><\/span>Lehoczki A, Fekete M, Fazekas-Pongor V, Ocana A, \u00e9s mtsai. NRF2 pathway activation predicts poor prognosis in lung cancer: a cautionary note on antioxidant interventions. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius 19.; <\/span><\/p>\n

31. Sziklavari Z, Hammoudeh S, Petrone AM, Stange S, Orban K, <\/span>Fekete JT<\/b><\/span>, \u00e9s mtsai. Outcomes of Vacuum-Assisted Closure in Patients with Empyema Thoracis: A 10-Year Experience<\/span>. Ann Thorac Surg.<\/b><\/span> 2025. j\u00fanius;119(6):1206\u201312. <\/span><\/p>\n

32. Ungvari Z, Fekete M, Varga P, Lehoczki A, <\/span>Fekete JT,<\/b><\/span> Ungvari A, \u00e9s mtsai. Overweight and obesity significantly increase colorectal cancer risk: a meta-analysis of 66 studies revealing a 25-57% elevation in risk. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):3343\u201364. <\/span><\/p>\n

33. Ungvari Z, <\/span>Menyhart O<\/b><\/span>, Lehoczki A, Fekete M, Bianchini G, Gy\u0151rffy B. PCSK9 expression and cancer survival: a prognostic biomarker at the intersection of oncology and geroscience. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius 27.; <\/span><\/p>\n

34. Sztupinszki Z, Fiam R, Pipek O, Diossy M, B\u00f6rcs\u00f6k J, Prosz A, <\/span>Szallasi Z<\/b><\/span> \u00e9s mtsai. Polymerase theta expression is correlated with proliferative capacity but not with DNA repair deficiency status in solid tumors<\/span>. NPJ Precis Oncol<\/b><\/span>. 2025. j\u00fanius 20.;9(1):200. <\/span><\/p>\n

35. Tian L, Jiao X, Wang C, Li D, Ertel A, Achinger-Kawecka J, <\/span>Gyorffy B<\/b><\/span> \u00e9s mtsai. PPAR\u03b3 acetylation governs mammary adenocarcinoma tumor growth via acetylated residues that determine DNA sequence-specific binding. <\/span>Oncogene.<\/b><\/span> 2025. szeptember;44(37):3476\u201392. <\/span><\/p>\n

36. Lehoczki A, <\/span>Menyhart O,<\/b><\/span> Andrikovics H, Fekete M, Kiss C, Mikala G, \u00e9s mtsai. Prognostic impact of a senescence gene signature in multiple myeloma. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):5025\u201337. <\/span><\/p>\n

37. Ungvari Z<\/span>, Bartha \u00c1<\/b><\/span>, Ungvari A, Fekete M, Bianchini G, <\/span>Gy\u0151rffy B.<\/b><\/span> Prognostic impact of glucagon-like peptide-1 receptor (GLP1R) expression on cancer survival and its implications for GLP-1R agonist therapy: an integrative analysis across multiple tumor types. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):4413\u201327. <\/span><\/p>\n

38. Kuras M, Betancourt LH, Hong R, Szadai L, Rodriguez J, Horvatovich P, <\/span>Szasz AM<\/b><\/span> \u00e9s mtsai. Proteogenomic Profiling of Treatment-Na\u00efve Metastatic Malignant Melanoma. <\/span>Cancers<\/b><\/span>. 2025. febru\u00e1r 27.;17(5):832. <\/span><\/p>\n

39. Ungvari Z, Fekete M, Buda A, Lehoczki A, <\/span>Munk\u00e1csy G<\/b><\/span>, Scaffidi P, \u00e9s mtsai. Quantifying the impact of treatment delays on breast cancer survival outcomes: a comprehensive meta-analysis. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius 10.; <\/span><\/p>\n

40. B\u00f6rcs\u00f6k J, Gopaul D, Devesa-Serrano D, Mooser C, Jonsson N, Cagiada M, <\/span>Szallasi Z<\/b><\/span> \u00e9s mtsai. Quantitative functional profiling of ERCC2 mutations deciphers cisplatin sensitivity in bladder cancer. <\/span>J Clin Invest<\/b><\/span>. 2025;135(16):e186688. <\/span><\/p>\n

41. <\/span>Dobson L, Tusn\u00e1dy GE<\/b><\/span>, Tompa P. Regularly updated benchmark sets for statistically correct evaluations of AlphaFold applications<\/span>. Brief Bioinform<\/b><\/span>. 2025. m\u00e1rcius 4.;26(2):bbaf104. <\/span><\/p>\n

42. Ungv\u00e1ri Z, <\/span>Menyhart O,<\/b><\/span> Ocana A, Fekete M, Lehoczki A, <\/span>Gy\u0151rffy B<\/b><\/span>. Senescence-associated gene signatures predict survival in lung cancer: a multi-cohort analysis. <\/span>GeroScience.<\/b><\/span> 2025. szeptember 27.; <\/span><\/p>\n

43. Ungvari Z, Ungvari A, Fekete M, Kiss C, <\/span>Gy\u0151rffy B<\/b><\/span>. Senescence-related genes as prognostic indicators in breast cancer survival. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):2995\u20133006. <\/span><\/p>\n

44. Ungvari Z, Fekete M, Lehoczki A, <\/span>Munk\u00e1csy G, Fekete JT<\/b><\/span>, Z\u00e1b\u00f3 V, \u00e9s mtsai. Sleep disorders increase the risk of dementia, Alzheimer\u2019s disease, and cognitive decline: a meta-analysis. <\/span>GeroScience<\/b><\/span>. 2025. j\u00fanius;47(3):4899\u2013920. <\/span><\/p>\n

45. Raab M, <\/span>Gy\u0151rffy B,<\/b><\/span> Pe\u00f1a-Llopis S, Fietz D, Kressin M, Kolaric M, \u00e9s mtsai. Targeted reactivation of the novel tumor suppressor DAPK1, an upstream regulator of p53, in high-grade serous ovarian cancer by mRNA liposomes reduces viability and enhances drug sensitivity in preclinical models. <\/span>Cancer Commun Lond Engl<\/b><\/span>. 2025;45(8):966\u201370. <\/span><\/p>\n

47. Salman ND, Hanker LC, <\/span>Gy\u0151rffy B, Bartha \u00c1<\/b><\/span>, Proppe L, G\u00f6tte M. The Prognostic Value of the Hedgehog Signaling Pathway in Ovarian Cancer<\/span>. Int J Mol Sci<\/b><\/span>. 2025. j\u00fanius 19.;26(12):5888. <\/span><\/p>\n

48. Fekete M, Varga P, Ungvari Z, <\/span>Fekete JT<\/b><\/span>, Buda A, Szappanos \u00c1, \u00e9s mtsai. The role of the Mediterranean diet in reducing the risk of cognitive impairement, dementia, and Alzheimer\u2019s disease: a meta-analysis. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):3111\u201330. <\/span><\/p>\n

49. Bajtai E, Kiss C, Bakos \u00c9, Lang\u00f3 T, Lovrics A, Sch\u00e1d \u00c9, \u00e9s mtsai. Therapy-induced senescence is a transient drug resistance mechanism in breast cancer. <\/span>Mol Cancer<\/b><\/span>. 2025. m\u00e1jus 1.;24(1):128. <\/span><\/p>\n

50. <\/span>Tusn\u00e1dy GE<\/b><\/span>, Gerd\u00e1n C. TmDet 4.0: determining membrane orientation of transmembrane proteins from 3D structure<\/span>. Nucleic Acids Res.<\/b><\/span> 2025. j\u00falius 7.;53(W1):W542\u20136. <\/span><\/p>\n

51. Ungvari Z, Fekete M, <\/span>Fekete JT<\/b><\/span>, Lehoczki A, Buda A, <\/span>Munk\u00e1csy G,<\/b><\/span> \u00e9s mtsai. Treatment delay significantly increases mortality in colorectal cancer: a meta-analysis. <\/span>GeroScience.<\/b><\/span> 2025. j\u00fanius;47(3):5337\u201353. <\/span><\/p>\n

52. Raab M, Gasimli K, <\/span>Gy\u0151rffy B,<\/b><\/span> Pe\u00f1a-Llopis S, Becker S, Sanhaji M, \u00e9s mtsai. Truncated DAPK Variants Restore Tumor Suppressor Activity and Synergize with Standard Therapies in High-Grade Serous Ovarian Cancer. <\/span>Cancers.<\/b><\/span> 2025. j\u00fanius 8.;17(12):1910. <\/span><\/p>\n

53. Pla I, Szabolcs BL, P\u00e9ter PN, Ujfaludi Z, Kim Y, Horvatovich P, <\/span>Bartha A, Szasz AM, Gyorffy B<\/b><\/span> \u00e9s mtsai. Unbiased Drug Target Prediction Reveals Sensitivity to Ferroptosis Inducers, HDAC and RTK Inhibitors in Melanoma Subtypes. <\/span>Int J Dermatol.<\/b><\/span> 2025. m\u00e1jus;64(5):870\u201381. <\/span><\/p>\n

54. <\/span>Kov\u00e1cs SA,<\/b><\/span> Kov\u00e1cs T, <\/span>L\u00e1nczky A<\/b><\/span>, Pa\u00e1l \u00c1, Heged\u0171s ZI, Sayour NV, \u00e9s mtsai. Unlocking the power of immune checkpoint inhibitors: Targeting YAP1 reduces anti-PD1 resistance in skin cutaneous melanoma. <\/span>Br J Pharmacol<\/b><\/span>. 2025;182(16):3903\u201322. <\/span><\/p>\n

55. Nava V, Dar JY, De Santis V, Fehlinger L, Pasqualini J, Adekolurejo OA, <\/span>Figler A<\/b><\/span> \u00e9s mtsai. Zooming in the plastisphere: the ecological interface for phytoplankton-plastic interactions in aquatic ecosystems. <\/span>Biol Rev Camb Philos Soc<\/b><\/span>. 2025. \u00e1prilis;100(2):834\u201354. <\/span><\/p>\n

56. V\u00e1radi M, Horv\u00e1th O, So\u00f3s E, Csizmarik A, N\u00e9meth B, <\/span>Gy\u0151rffy B<\/b><\/span>, \u00e9s mtsai. Combining molecular patterns and clinical data for better immune checkpoint inhibitor prediction in metastatic urothelial carcinoma<\/span>. Cancer Immunol Immunother<\/b><\/span> CII. 2025;74(12):370. <\/span><\/p>\n

57. Ungvari Z, <\/span>Fekete JT<\/b><\/span>, Fekete M, Lehoczki A, Gulej R, Sorond F, \u00e9s mtsai. Mortality, functional outcome, and bleeding risk after early versus delayed thrombectomy. <\/span>GeroScience.<\/b><\/span> 2025. okt\u00f3ber 16.; <\/span><\/p>\n

58. <\/span>Posta M, Gy\u0151rffy B<\/b><\/span>. Pathway-level mutational signatures predict breast cancer outcomes and reveal therapeutic targets. <\/span>Br J Pharmacol<\/b><\/span>. 2025;182(23):5734\u201347. <\/span><\/p>\n

59. Pedregal M, Morafraile EC, Garrido A, Doger B, Hernandez T, Morillo D, <\/span>Gy\u0151rffy B<\/b><\/span> \u00e9s mtsai. Prolonged survival in a patient with pbrm1 mutated metastatic cholangiocarcinoma receiving tazemetostat. <\/span>NPJ Precis Oncol<\/b><\/span>. 2025. okt\u00f3ber 24.;9(1):331. <\/span><\/p>\n

60. Antal R, Beny\u00f3 Z, Nagy ZZ, Kov\u00e1cs I, <\/span>Fekete JT, Gy\u0151rffy B<\/b><\/span>, \u00e9s mtsai. Recent advances in treating age-related macular degeneration and diabetic retinopathy: Current therapies and emerging novel approaches<\/span>. GeroScience<\/b><\/span>. 2025. okt\u00f3ber 12.; <\/span><\/p>\n

61. <\/span>Menyhart O, Gy\u0151rffy B<\/b><\/span>. Subtype-specific genetic drivers of immune evasion in breast cancer. <\/span>Immuno-Oncol Technol.<\/b><\/span> 2025;28:101075. <\/span><\/p>\n

62. <\/span>Murmu A, Gy\u0151rffy B.<\/b><\/span> Targeting the HMGB1-IL32 pathway to alleviate T cell exhaustion in epithelial ovarian cancer. <\/span>GeroScience.<\/b><\/span> 2025; <\/span><\/p>\n

63. Habenicht L, Hassan N, Espinoza-S\u00e0nchez NA, Onyeisi JOS, <\/span>Gy\u0151rffy B,<\/b><\/span> Hanker L, \u00e9s mtsai. The Role of the Cell Surface Heparan Sulfate Proteoglycan Syndecan-3 in Breast Cancer Pathophysiology. <\/span>Cells<\/b><\/span>. 2025. okt\u00f3ber 17.;14(20):1612. <\/span><\/p>\n

64. L\u00f3pez-Cade I, G\u00f3mez-Sanz A, Sanvicente A, D\u00edaz-Tejeiro C, Manzano A, P\u00e9rez-Segura P, <\/span>Gyorffy B<\/b><\/span> \u00e9s mtsai. Comparative Evaluation of Mutect2, Strelka2, and FreeBayes for Somatic SNV Detection in Synthetic and Clinical Whole-Exome Sequencing Data. <\/span>Biomolecules<\/b><\/span>. 2025. okt\u00f3ber 30.;15(11):1532. <\/span><\/p>\n

65. Nugnes MV, Bouhraoua KEA, Zoubiri M, Pancsa R, Fich\u00f3 E, DisProt Consortium, <\/span>Dobson L<\/b><\/span> \u00e9s mtsai. DisProt in 2026: enhancing intrinsically disordered proteins accessibility, deposition, and annotation. <\/span>Nucleic Acids<\/b><\/span> Res. 2025;gkaf1175. <\/span><\/p>\n

66. Kuffa K, Lang\u00f3 T, Czir\u00f3k A, T\u00e1rnoki-Z\u00e1ch J, B\u0151sze S, <\/span>Tusn\u00e1dy GE<\/b><\/span>, \u00e9s mtsai. Optimization of Methods for the Quantitative Analysis of Global Cell Surface Proteome and Cell Surface Polarization. <\/span>Int J Mol Sci<\/b><\/span>. 2025;26(23):11570. <\/span><\/p>\n

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 <\/p>\n","protected":false},"excerpt":{"rendered":"

1. Menyhart O, Kothalawala WJ, Gy\u0151rffy B. A gene set enrichment analysis for cancer hallmarks. J Pharm Anal. 2025. m\u00e1jus;15(5):101065. 2. Guedes J, Woldmar N, Szasz AM, Wieslander E, Paw\u0142owski K, Horvatovich P, \u00e9s mtsai. A perspective on integrating digital pathology, proteomics, clinical data and AI analytics in cancer research. J Proteomics. 2025. szeptember 15.;320:105493. …<\/p>\n","protected":false},"author":102440,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"categories":[],"tags":[],"class_list":["post-10746","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/pages\/10746","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/users\/102440"}],"replies":[{"embeddable":true,"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/comments?post=10746"}],"version-history":[{"count":10,"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/pages\/10746\/revisions"}],"predecessor-version":[{"id":11351,"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/pages\/10746\/revisions\/11351"}],"wp:attachment":[{"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/media?parent=10746"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/categories?post=10746"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/semmelweis.hu\/bioinformatika\/wp-json\/wp\/v2\/tags?post=10746"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}